Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLVLAVLLTVAAADSGISPRAVWQFRKMIKCVIPGSDPFLEYNNYGCYCGLGGSGTPVDELDKCCQTHDNCYDQAKKLDSCKFLLDNPYTHTYSYSCSGSAITCSSKNKECEAFICNCDRNAAICFSKAPYNKAHKNLDTKKYCQS
2BAX Chain:A ((1-121))
----------------------ALWQFNGMIKCKIPSSEPLLDFNNYGCYCGLGGSGTPVDDLDRCCQTHDNCYMQAMKLDSCKVLVDNPYTNNYSYSCSNNEITCSSENNACEAFICNCDRNAAICFSKVPYNKEHKNLDKK-----
General information:
TITO was launched using:
RESULT:
Template:
2BAX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69921 for 908 contacts (-77.0/contact) +
2D Compatibility (PS) -12760 + (NN) -8082 + (LL) 2520
1D Compatibility (HY) -16400 + (ID) 4750
Total energy: -109393.0 ( -120.48 by residue)
QMean score : 0.370
(partial model without unconserved sides chains):
PDB file :
Tito_2BAX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BAX-query.scw
PDB file :
Tito_Scwrl_2BAX.pdb
: