Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKYLLPVLVLCLGYYYSTNEEFRPEMLQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAGTMEDMAFAERFVVEAGKLLGGLDMLILNHITQTTMSLFHDDIHSVRRSMEVNFLSYVVLSTAALPMLKQSNGSIAIISSMAGKMTQPLIASYSASKFALDGFFSTIRKEHLMTKVNVSITLCVLGFIDTETALKETSGIILSQAAPKEECALEIIKGTVLRKDEVYYDKSSWTPLLLGNPGRRIMEFLSLRSYNRDLFVSN
3BZU Chain:C ((18-276))
-------------------NEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAV-----MQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLIRNPSRKILEFLYST----------
General information:
TITO was launched using:
RESULT:
Template:
3BZU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -171433 for 2155 contacts (-79.6/contact) +
2D Compatibility (PS) -27581 + (NN) -9761 + (LL) 2520
1D Compatibility (HY) -34800 + (ID) 10000
Total energy: -251055.0 ( -116.50 by residue)
QMean score : 0.475
(partial model without unconserved sides chains):
PDB file :
Tito_3BZU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BZU-query.scw
PDB file :
Tito_Scwrl_3BZU.pdb
: