Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
1RA2 Chain:A ((1-159))
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLDKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
General information:
TITO was launched using:
RESULT:
Template:
1RA2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118457 for 1177 contacts (-100.6/contact) +
2D Compatibility (PS) -17415 + (NN) -10056 + (LL) 0
1D Compatibility (HY) -22400 + (ID) 7900
Total energy: -176228.0 ( -149.73 by residue)
QMean score : 0.790
(partial model without unconserved sides chains):
PDB file :
Tito_1RA2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RA2-query.scw
PDB file :
Tito_Scwrl_1RA2.pdb
: