Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MACGLVASNLNLKPGECLRVRGEVAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVFPFQPGSVAEVCITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAADGDFKIKCVAFD
1HLC Chain:A ((2-128))
----LEVKNMDMKPGSTLKITGSIADGTDGFVINLGQGTDKLNLHFNPRFSE----STIVCNSLDGSNWGQEQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVRGGFNMSSFKLK
General information:
TITO was launched using:
RESULT:
Template:
1HLC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72786 for 927 contacts (-78.5/contact) +
2D Compatibility (PS) -13220 + (NN) -1381 + (LL) 176
1D Compatibility (HY) -10800 + (ID) 2800
Total energy: -100811.0 ( -108.75 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_1HLC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HLC-query.scw
PDB file :
Tito_Scwrl_1HLC.pdb
: