Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEEGGDFDNYYGADNQSECEYTDWK------SSGALIPAIYMLVFLLGTTGNGLVLWTVFRSSREK--RRSADIFIASLAVADLTFVVTLPLWATYTYRDYDWPFGTFFCKLSSYLIFVNMYASVFCLTGLSFDRYLAIVRPVANARLRLRVSGAVATAVLWVLAALLAMPVMVLRTTGDLENTTKVQCYMDYSMVATVSSEWAWEVGLGVSSTTVGFVVPFTIMLTCYFFIAQTI--AGHFRKERIEGLRKRRRLLSIIVVLVVTFALCWMPYHLVKTLYMLGSLLHWPCDFDLFLMNIFPYCTCISYVNSCLNPFLYAFFDPRFRQACTSMLCCGQSRCAGTSHSSSGEKSASYSSGHSQGPGPNMGKGGEQMHEKSIPYSQETLVVD |
| 1U19 Chain:A ((4-349)) | MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFG-ENHAIMGVAFTWVMALACAAPPLVGWSRY-IPEGMQCSCGIDY---YTPHEETNNESFVIYMFVVH-FIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFT----HQGSDFGPIFMTIPAFFAKTSAV---YNPVIYIMMNKQFRNCMVTTLCCGKNP------LGDDEASTTVSKTETSQVAPA----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -242570 for 2732 contacts (-88.8/contact) +
2D Compatibility (PS) -33967 + (NN) -9505 + (LL) 1420
1D Compatibility (HY) -1200 + (ID) 1450
Total energy: -287272.0 ( -105.15 by residue)
QMean score : 0.159
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