Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MWPNGSSLGPCFRPTNITLEERRLIASPWFAASFCVVGLASNLLALSVLAGARQGGSHTRSSFLTFLCGLVLTDFLGLLVTGTIVVSQHAALFEWHAVDPGCRLCRFMGVVMIFFGLSPLLLGAAMASERYLGITRPFSRPAVASQRRAWATVGLVWAAALALGLLPLLG-VGRYTVQY-----PGSWCFLTLGAESGDVAFGLL-FSMLGGLSVGLSFLLNTVSVATLCHVYHGQEAA--------------------------------------------------------------------------------------------------------------------------------------------------------QQRPRDSEVEMMAQLLGIMVVASVCWLPLLVFIAQTVLRNPPAMSPAGQLSRTTEKELLIYLRVATWNQILDPWVYILFRRAVLRRLQPRLSTRPRSLSLQPQLTQRSGLQ |
2RH1 Chain:A ((41-477)) | ------------------------VGMGIVMSLIVLAIVFGNVLVITAIAKFERL----QTVTNYFITSLACADLVMGLAVVPFGAAHILM-KMWTF---GNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFT----NQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN----------LIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210720 for 2096 contacts (-100.5/contact) +
2D Compatibility (PS) -29438 + (NN) -17388 + (LL) 2472
1D Compatibility (HY) -16400 + (ID) 2150
Total energy: -273624.0 ( -130.55 by residue)
QMean score : 0.321
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