Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRHSKRTYCPDWDDKDWDYGKWRSSSSHKRRKRSHSSAQENKRCKYNHSKMCDSHYLESRSINEKDYHSRRYIDEYRNDYTQGCEPGHRQRDHESRYQNHSSKSSGRSGRSSYKSKHRIHHSTSHRRSHGKSHRRKRTRSVEDDEEGHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY-DDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKR-KYFHHDRLD-----WDEHSSAGR-YVSRRCKP----LKEFMLSQD--V----EHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKSI |
| 4IIR Chain:A ((13-350)) | ---------------------------------------------------------------------------------------------------------------------------------------------WTDAEGYYRVNIGEVLDKRYNVYGYTGQG--SNVVRARDNARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNES------------------KTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKSYDYGIDMWSVGCTLYELYTGKILFPGKTNNHMLKLAMDLKGKMPNKMIRKGVFKDQHFD-QNLNFMYIE------REKVTVMSTINPTKDLLADLI----LPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQE----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4IIR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -196657 for 2421 contacts (-81.2/contact) +
2D Compatibility (PS) -33186 + (NN) -14149 + (LL) 7436
1D Compatibility (HY) -28000 + (ID) 4900
Total energy: -269456.0 ( -111.30 by residue)
QMean score : 0.553
|
|
|