Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLARRKPVLPALTINPTIAEGPSPTSEGASEANLVDLQKKLEELELDEQQKKRLEAFLTQKAKVGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLTNHTFIKRSEVEEVDFAGWLCKTLRLNQPGTPTRTAV
4NZW Chain:B ((13-274))------------------------------------------------------------HSRVDP--EELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP-LEETYIATILREILKGLDYLHSERKI-HRDIKAANVLLSEQGDVKLAAFGVAG------------TPFWMAPEVIKQ--YDFKADIWSLGITAIELAKGE----PPNS--------------------------------------DLHPMRVLF----LIPKNSPPTL-EGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTSFLTELIDRYKRWKS---------


General information:
TITO was launched using:
RESULT:

Template: 4NZW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102703 for 1936 contacts (-53.0/contact) +
2D Compatibility (PS) -26887 + (NN) -20168 + (LL) 7560
1D Compatibility (HY) -20400 + (ID) 4500
Total energy: -167098.0 ( -86.31 by residue)
QMean score : 0.426

(partial model without unconserved sides chains):
PDB file : Tito_4NZW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NZW-query.scw
PDB file : Tito_Scwrl_4NZW.pdb: