Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMESPASSQPASMPQSKGKSKRKKDLRISCMSKPPAPNPTPPRNLDSRTFITIGDRNFEVEADDLVTISELGRGAYGVVEKVRHAQSGTIMAVKRIRATVNSQEQKRLLMDLDINMRTVDCFYTVTFYGALFREGDVWICMELMDTSLDKFYRKVLDKNMTIPEDILGEIAVSIVRALEHLHSKLSVIHRDVKPSNVLINKEGHVKMCDFGISGYLVDSVAKTMDAGCKPY-MAPERINPE-LNQKGYNVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEPSPQLPADRFSPEFVDFTAQCLRKNPAERMSYLELMEHPFFTLHKTKKTDIAAFVKEILGEDS
4USE Chain:B ((24-280))------------------------------------------------------------------VGELGDGAFGKVYKAKNKETGALAAAKVIE-----EELEDYIVEIEI-LATCDHPYIVKLLGAYY-----WIMIEFCPGGAVDAIMLELDRGLTEPQ--IQVVCRQMLEALNFLHSK-RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK------TPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEAKAEVME


General information:
TITO was launched using:
RESULT:

Template: 4USE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117747 for 1728 contacts (-68.1/contact) +
2D Compatibility (PS) -25192 + (NN) -6675 + (LL) 3076
1D Compatibility (HY) -18400 + (ID) 4450
Total energy: -169388.0 ( -98.03 by residue)
QMean score : 0.406

(partial model without unconserved sides chains):
PDB file : Tito_4USE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4USE-query.scw
PDB file : Tito_Scwrl_4USE.pdb: