Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSSQVVGIEPLYIKAEPASPDSPKGSSETETEPPVALAPGPAPTRCLPGHKEEEDGEGAGPGEQGGGKLVLSSLPKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFPAGPLAVAGGPRKTAAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLD-EEGARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSV------HIEDAEAVEQLREALHEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFLEMLEAMMD
2YAT Chain:A ((14-247))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DQMVSALLDAEPPILYSE----------SMMGLLTNLADRELVHMINWAKRVPGFVDLTLHDQVHLLESAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRN---------EIFDMLLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFSTLKSLEEKDHIHRVLDKITDTLIHLMA-KAGLTLQQQHQRLAQLLLILSHIRHMSNKGMEHLYSMKSKNVVPLYDLLLEMLDAHR-


General information:
TITO was launched using:
RESULT:

Template: 2YAT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -132717 for 1523 contacts (-87.1/contact) +
2D Compatibility (PS) -23147 + (NN) -21712 + (LL) 7524
1D Compatibility (HY) -22400 + (ID) 3750
Total energy: -196202.0 ( -128.83 by residue)
QMean score : 0.474

(partial model without unconserved sides chains):
PDB file : Tito_2YAT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YAT-query.scw
PDB file : Tito_Scwrl_2YAT.pdb: