Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGEKKLKAAVVLSGCGHLDGAEVREVVLSLLVLDQQEVEVKCFAPDI-NITQVVNHKTTEAVKEKRN-VLVEAARVARSEICDLKEAKAEDFDMLVVPGGYGVAKNLSDLAEDKEVVTVIPEFERLVSEFFATKKPIGAICISPAIIVS--ILSSKTSKGESKIKVTIGDDREKLIEKLGGEHIKCDTGLSIEDEEHNVFSCSAYMR---RDESTYSVYQGIKHMIDSMVKKTNKRI
1OI4 Chain:A ((21-192))
--GLSKKIAVLI-----TDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVKGKK-----------GEASV-------TIDKSIDEVTPAEFDALLLPGGHSPDY-LR----------GDNRFVTFTRDFVNSGKPVFAICHGPQLLISADVIRG--------RKLTAVKPIIIDVKNAGAEFYD---QEVVV-DKDQLVTSRTPDDLPAFNREALRLLGA----------------
General information:
TITO was launched using:
RESULT:
Template:
1OI4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136999 for 1439 contacts (-95.2/contact) +
2D Compatibility (PS) -17659 + (NN) -2222 + (LL) 3660
1D Compatibility (HY) -800 + (ID) 1500
Total energy: -155520.0 ( -108.08 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_1OI4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OI4-query.scw
PDB file :
Tito_Scwrl_1OI4.pdb
: