Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFAVEQAKLAKK--NDEIPIGAVIVSGDN-IISFAHNISNDPTAHAEMLVIRQACELLSTSVLCNADMYVTLEPCP------MCAQAISFARIKRLYFGAYNSKGGGIENGAKIFQFCSHVPEVYGGVLETECSFLLKDFFEKLRDSTNYY
2B3Z Chain:A ((18-160))
MKLALDLAKQGEGQTESNPLVGAVVVK-DGQIVGMGAHL-KYGEAHAEVHAIHMAGA-----HAEGADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDPNPLVAGRGISMMK--EAGIEVREGILADQAERLNEKFLHFMRTGLPYV
General information:
TITO was launched using:
RESULT:
Template:
2B3Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107317 for 1123 contacts (-95.6/contact) +
2D Compatibility (PS) -14534 + (NN) -8257 + (LL) 336
1D Compatibility (HY) -7200 + (ID) 2000
Total energy: -138972.0 ( -123.75 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_2B3Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B3Z-query.scw
PDB file :
Tito_Scwrl_2B3Z.pdb
: