Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTSAIFFSEGSYIVIMNNIIVKKFGGTSLTDL---TRVANLIKKDVDKGYRIIVVVSAIAGLTDQMVFQARQTLNL-------------------------------------------------S-----HKQALSEYDVMLSAGEQISCGLLAITLLSIGVNAKSWLAWQLPIITDNSYSESKIKTIK-IDHLKRSFAEGYTVAIIAGFQGIYD-DRITTFGRGGSDISAVALAVAFGVRVCEIFTDIDGIYTADPKIVPKARKLKSISYDEMLEMSSSGAKILHNRSVQLAMKHNIKVQVLSTFKE-VEGTAVLHENDVLERHTITGITYSTNEALITFTNFAN------TLRTLKDMAGANIKIDMIHGS------SIVISEFDIDLMKELLN-KN-----E----DYV-INNNAAKISIIGIGV------MSVMYHTLKFFSEKKIEILA--ITASEIKISIIVQRECAEALVRDLHTELMCTEGG |
| 3C1M Chain:A ((2-470)) | -------------------TTVMKFGGTSVGSGERIRHVAKIVTKRKKEDDDVVVVVSAMSEVTNALVEISQQALDVRDIAKVGDFIKFIREKHYKAIEEAIKSEEIKEEVKKIIDSRIEELEKVLIGVAYLGELTPKSRDYILSFGERLSSPILSGAIRDLGEKSIALEGGEAGIITDNNFGSARVKRLEVKERLLPLLKEG-IIPVVTGFIGTTEEGYITTLGRGGSDYSAALIGYGLDADIIEIWTDVSGVYTTDPRLVPTARRIPKLSYIEAMELAYFGAKVLHPRTIEPAMEKGIPILVKNTFEPESEGTLITNDMEM-SDSIVKAISTIKNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSETNISLVVSEEDVDKALKALKREFGDSFLNNNLIRDVSVDKDVCVISVVGAGMRGAKGIAGKIFTAV---SESGANIKMIAQGSSEVNISFVIDEKDLLNCVRKLHEKFIEK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -297586 for 3236 contacts (-92.0/contact) +
2D Compatibility (PS) -40515 + (NN) -13767 + (LL) 1788
1D Compatibility (HY) -24800 + (ID) 5650
Total energy: -380530.0 ( -117.59 by residue)
QMean score : 0.514
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