Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLSKYKNQSVAVFGLGKTGLS-VINVLIKSGAKAYAWDDSKEQMANAKTMYKEC-NFIHPKKYDWHEIKALILSPGVPISYPKPHWIVKLARSFDCKIKSDIELFLEAKA-KNQKIVGVTGTNGKSTTTSLIGHILKSAGKK--VAIGGNLGVPILD--LEKDAEIYVIEISSFQLELINMPAVIPVHDHTFFSGSQYRAAWMIKRVSEMTKKMTEVTKRMAGMIKVDISVLLNITLDHIDRHG-SMENYIAVKSKLIGGSKVAVIGCDNEITADIFNKFTGNKIPISGVRSLLDDKKGAEI-------QEISLKLENHNLSASDAKINLTSNAENIAASCAVCKLLKVDSSTIIDGIKSFSGLKHRNELLGK--IENVLFVNDSKATNAESSKKAILSYK------NIYWIVGGRSKEGGIESLSKHFARIRKALLIGEST--EVFASTMEN-KVDYVRCCNLEDAFRLAFEEAIKSKEKTTILLSPACASFDQWRNFEERGEAFCRMFEKLRDSFTITRVV |
| 1J6U Chain:A ((0-446)) | -------HMKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERT-AYLRKLGIPIFVPHSADNWYDPDLVIKTPAVRDDNPE----IVRARMERVPIENRLHYFRDTLKREKKEEFAVTGTDGKTTTTAMVAHVLKHLRKSPTVFLGGIMD-SLEHGNYEKGNGPVVYELDESEEF-FS-------------------------------------------EFSPNYLIITNARGDHLENYGNSLTRYRSAFEKISRNTDLVVTFAEDELTSHLG-------DVTFGVKKG---TYTLEMRSASRAEQKAMVEKNGKRYLELKLKVPGFHNVLNALAVIALFDSLGYDLAPVLEALEEFRGVHRRFSIAFHDPETNIYVIDD-YAHTPDEIRNLLQTAKEVFENEKIVVIFQP-HR----GNFAKALQLADEVVVTEVYDSGKMIWDSLKSLGKEAYFVEKLPELEKVI-S----VSENTVFLFVGAGDIIYSSRRFVERYQSSK---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 87228 for 3265 contacts (26.7/contact) +
2D Compatibility (PS) -38837 + (NN) 18906 + (LL) 7224
1D Compatibility (HY) 20400 + (ID) 1150
Total energy: 93771.0 ( 28.72 by residue)
QMean score : -0.025
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