Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPELPEVEIISNFLFDKIKNKQISGVTVNNWNLRVPITQNIDDVIKGKVINNIKRRGKYIIWHIDNDIVVTVHLGMSGKLIYAKGEQAQNKHDHVIFSFSDNTSIIFNDPRKFGLVIILNKEQEVNFF--NDFGIEPFTDEFNGDYLQKLLKSKKVNIKSALMNNKLIVGIGNIYASESLFRARISPLRSAQDLTYKECEKLATEIKNTLSDAIIAGGSTLKDYAQPSGSVGYFQNSFYVYGKVQKPCKICNNTITLIRQNGRSTYFCNACQN |
4PCZ Chain:A ((1-270)) | -PELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKTIQGISRRGKYLIFEIGDDFRLISHLRMEGKYRLATLDAPREKHDHLTMKFADG-QLIYADVRKFGTWELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGNIYVDEVLWLAKIHPEKETNQLIESSIHLLHDSIIEILQKAIKLGGSSIRTYS-ALGSTGKMQNELQVYGKTGEKCSGCGAEIQKIKVAGRGTHFCPVCQQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126868 for 2191 contacts (-57.9/contact) +
2D Compatibility (PS) -29277 + (NN) -14626 + (LL) 380
1D Compatibility (HY) -17200 + (ID) 4550
Total energy: -192141.0 ( -87.70 by residue)
QMean score : 0.480
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