Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHDKFDNVTFTINGTRESLFNFVFCEDQCTELSVQKTLDYLRARNIEATWVMNSHTKTQGILEKCGIKHVSTPKKVLLNMKNYFLPADVVPGLKLNAVTSSNLLKQLDSYTSKIFHHSIGIVSTFFRGLSNYDDKNSGLRFFLVTLNDEIIGTCGFYIQ----------------DSVAGFYSDGVLPIYRNRGIGTQMVLDRIKIIQQL-ECKHVVAHCMKPSVNLYKRLGFQILGNLYLYTSSA |
| 1KUX Chain:A ((32-179)) | -----------------------------------------------------------------------------------------LPANEFRCL-TPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFL-TLCPELSLGWFVEGRLVAFIIGSLWDEERLTQESLALHRPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAVLMCEDALVPFYQRFGFHPAGPCAIVVGSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KUX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93537 for 938 contacts (-99.7/contact) +
2D Compatibility (PS) -13846 + (NN) -681 + (LL) 6344
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -106920.0 ( -113.99 by residue)
QMean score : 0.435
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