Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKEKYSFKEVENKYNILWEDSRVYKWDG--KKENTFTIDTPPPTISGKLHIGHIFSYCHTDFIARFQRMLGKDIFYPIGFDDNGLPTERLVEQTYKTRAREVGREKFIEMCHEVIEKSKQEFKELLRSVGISYDWSLEYHTISKETVTLSQMSFIDLYNKGYAYRKMQPILWDPVDKTAIAQAEIEDKVC-----------ESSLNTITFS--------------------------------------TEE-NEQIDIATTRPELFLACVAVFCHPEDARYA-----------------------------------HLIGKTSVVPIIGVKVPIIADGRVKIDKGTGLVMCCTFGDELDIYWQQKHNLPMKIIIDQDGKINLDSMYDNNRSQYQGIGMTGERSTGVIKEGAISPHYDVIPVRNTRIYDEINGLKVKEARKKIIKILTERGLLTGSTNISHSVKCAERSGVSLEILPTYQWFIKTLDQKAQVLDKVKECNWYPSTMRKRMEVWIEGLNWDWCISRQRYFGVPFPVWYSRRKGEEGKVILAEVEDLP----------------VDPLKD-------LPKGYSKEEVVPDQDVMDTWATSAITPQLSALAVNSEFSLPDHRYNTIFPADLRSQSHEIIRTWAFYTILKAYYHA------NSLPWKNIMVSGWCLA----------------------------------------------DDK-------KKMSKSKGNIITPKSILDTYGADVVRYWTAN-SRLGVDTVYSENILKIGKRLVTKLWNASKFVSIFMERYQAVSINSVSETMDQWILSKLYKVIEKATNNLLQFEYCEALGAVEGFFWKDFCDNYLELAKKRAYGDKVSSKANLSAKQSLTYVLNTILRLLAPFLPYITEQIYHQLYSDNSVHNRGNWPNKEELIYDKHSEEMGDKFMQILNLVRKIKADNNVSVKHLIKKLMIKANVKEDKLNQSAQNDLQTVCNAEMIEWSENAQAGLITENGKFIVSIDLY |
| 2V0C Chain:A ((2-813)) | ---EKYNPHAIEAKWQRFWEEKGFMKAKDLPG---KQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAALKFGV-------------HPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYRAKGLVNWCPKCQTVLANEQVVEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDLEGLNWPEKVKAMQRAWIGRSEGAEILFPVEGKEVRIPVFTTRPDTLFGATFLVLAPEHPLTLELAAPEKREEVLAYVEAAKRKTEIERQAEGREKTGVFLGAYALNPATGERIPIWTADYVLFGYGTGAIMAVPAHDQRDYEFARKFGLPIKKVIERPGEPLPEP----------LER--AYEEPGIMV-----------------NSGPFDGTESEEGKRKVIAWLEEKGLGKGR-----------------------------------------------------V---TYR-LRDWLISRQRYWGTPIPMVHCEACG-VVP--VPE-EELPVLLPDLKDVEDIRPKGKSPLEAHPEFYETTCPKCGG-PAKRDTDTMDTFFDSSWYYLRYTDPHNDRLPFDPEKANAWMPVDQYIGGVEHAVLHLLYSRFFTKFLHDLGMVKVEEPFQGLFTQGMVLAWTDFGPVEVEGSVVRLPEPTRIRLEIPESALSLEDVRKMGAELRPHEDGTLHLWKPAVMSKSKGNGVMVGPFVKEQGADIARITILFAAPPENEMVWTEEGVQGAWRFLNRIYRRVAEDREALLETSGVFQAEALEGKDRELYGKLHETLKKVTEDLEALRFNTAIAALMEFLN--ALYEYRKDR---------------PVTPVYRTAIRYYLQMLFPFAPHLAEELWHWFWP-DSLF-EAGWPELDEKALE--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -322267 for 5311 contacts (-60.7/contact) +
2D Compatibility (PS) -67057 + (NN) -17194 + (LL) 16308
1D Compatibility (HY) -21200 + (ID) 8150
Total energy: -419560.0 ( -79.00 by residue)
QMean score : 0.417
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