Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------MQQLKTKRVGIYVRVS--TEMQSTEGYSIDGQINQ-----------IKEYCDFHHFEVKDIYAD----------------------------RGISGKSMNRPELQRILKDAKEGYI------------DCVMVYKTNRLARNT-------------SDLLKIVEDLHKQNVEFFSLSER-----MEVNTSSGK--LMLQILASFSEFERNNIVENVFMGQTRRAQEGYYQG-NLPLGYDKIPNSKHELMINQHEAN-------------------------IVKYIFESYAKGHGY----RKIANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAKYK--DWSEKRRKGLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLT----GIIHCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRADVI--EDYVMKQILEIVKSDKVIQRVVTHVNQENQVDGAALH-HDIAYKQQQYDEVQI----KLNNLI-----KTIEDNPDLTSVIRPSIQKYEKQ----LNDITNQINQLKNQQNEDKPLFDAKEISKLL--------QHIFHDIKHIEKSRLKALYLSVIDRIDIKKDGNHKKQFYVTL-KLNNEIIKQLFNNKQLDEVHLSTSSLF--LPQTLYLTI----- |
| 4NL4 Chain:H ((18-747)) | SVAHVALPVPLPRTFDYLLPEGMAVKAGCRVRVPFGKQERIGIVAAVSERSELPLDELKPVAEALDDEPVFSTTVWRLLMWAAEYYHHPIGDVLFHALPVMLRQGKPASATPLWYWFATEQGQVVDLNGLKRSRKQ-QQALAALRQGKIWRHQVGELEFNEAALQALRGKGLAELACEATDWRSAYSVAGERLRLNTEQATAVGAIHSAADRFSAWLLAGITGSGKTEVYLSVLENVLAQGRQALVMVPEIGLTPQTIARFRQRFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSSLFTPFKDLGVIVIDEEHDSSYKQQEGWRYHARDLAVWRAHSEQI-----PIILGSATPALETLHNVRQGKYRQLTLSKPAQQHVLDLKGQPL--QAGLSPALISRMRQHLQ-ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDSYYTLHQAQH--------HLRCHHCDSQRPIPRQCPSCGSTHLVPVGIGTEQLEQALAPLFPEVPISRIDRHLAAVHRGGARILIGTQMLAKGHHFPDVTLVSLLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVILQTHHPEHPLLQTLLYKGYDAFAEQALAERQTMQLPPWTSHVLIRAEDHNNQQAPLFLQQLRNLLQASPLADEKLWVLGPVPALRWQILLQHPSRVRLQHIVSGTLALINTLPEAWVLDVDPIEG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NL4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 31184 for 3486 contacts (8.9/contact) +
2D Compatibility (PS) -54537 + (NN) -3346 + (LL) 1028
1D Compatibility (HY) -10800 + (ID) 4600
Total energy: -41071.0 ( -11.78 by residue)
QMean score : 0.171
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