Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEIKYKVITKDAFALPYTIIKAKN-QPTKGVIVYIHGGGLMFGKAND--LSPQYIDILT-EHYDLIQLSYRLL----PEVSLDCIIEDVYASFDAIQSQ---YSNCPIFTFGRSSGAYLSLLIAR-D------RDIDGVIDFYGYSRINTEPFKTTNSYYAKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPD---ELKTLPPVFIAHCNGDYDVPVEESEHIMN----HVPHSTFERVNKNEHDFDRR-P--NDE-AITIYRKVVDFLNAITMV |
| 1JKM Chain:A ((98-367)) | ---------GVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHR-RWCTDLAAAGSVVVMVDFRNAWTAEGHHPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGY-AWDHERRLT-E-LPSLVE-NDGYFIENGG-------MALLVRAYDPTGE------HAED---PIAWPYFASEDELRGLPPFVVAVNELDPLR--DEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JKM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133514 for 2111 contacts (-63.2/contact) +
2D Compatibility (PS) -25557 + (NN) -4196 + (LL) 3720
1D Compatibility (HY) -3600 + (ID) 1950
Total energy: -165097.0 ( -78.21 by residue)
QMean score : 0.472
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