Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNYGIPQNAIITIAGTVGVGKSTLTQALADKLN-FKTSFENVEHN------PYLDKFYSDFERWSFHLQIYFLAERFKEQKRMF-----EYG-GGFVQDRSIYEDVDIFAKMHEEEGTMSKEDFKTYSDLFNAMVMTPY-FPKPDVMIYLECNYDEVIDRIIERGREMEINTDPEYWKKLFKRYDDWINS---------FNACPVVRININEYDIHKDPESLNPMIDKIARIIQTYRQVDTR |
| 2OCP Chain:A ((1-239)) | -------GPRRLSIEGNIAVGKSTFVKLLTKTYPEWHVATEPVATWQNIQLGNLLDMMYREPARWSYTFQTFSFLSRLKVQLEPFPEKLLQARKPVQIFERSVYSDRYIFAKNLFENGSLSDIEWHIYQDWHSFLLWEFASRITLHGFIYLQASPQVCLKRLYQRAREEEKGIELAYLEQLHGQHEAWLIHKTTKLHFEALMNIPVLVLDVND-DFSEEVTKQEDLMREVNTFVK-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OCP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94943 for 1557 contacts (-61.0/contact) +
2D Compatibility (PS) -21679 + (NN) -4264 + (LL) 756
1D Compatibility (HY) -14400 + (ID) 2450
Total energy: -136980.0 ( -87.98 by residue)
QMean score : 0.581
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