Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWNKNRLTQMLSIEYPIIQAGMAGSTTPKLVASVSNSGGLGTIGAGY-FNTQQLEDEIDYVRQLTSNSFGVNVFVPSQQSYTSSQIENMNAWLKPYRRALHLEEPVVKIIEEQQFKCHIDTIIKKQVPVCCFTFGIPNESIIERLKEANIKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVSIPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDAIINSKETDTVVTKAFSGKLARGINNRFIEEMSQYEGD-IPDYPI-QNELT-SSIRKAAANIGDKELTHMWSGQSPRLATTH-PANTIMSNIINQINQIMQYK |
| 2GJL Chain:A ((3-319)) | -VFRTRFTETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKP-------------------------------VPYAEYRAAIIEAGIRVVETAGNDPG-EHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPGEDD--------IPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMGTRFLATRECPIHPAVKAAIRAADERSTDLIMRSLRNTARVARNAISQEVLAIEARGGAGYADIAALVSGQRGR-QVYQQGDTDLGIWSAGMVQGLIDDEPACAELLRDIVEQARQLVRQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GJL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166469 for 2809 contacts (-59.3/contact) +
2D Compatibility (PS) -33805 + (NN) -12050 + (LL) 3548
1D Compatibility (HY) -12400 + (ID) 4250
Total energy: -225426.0 ( -80.25 by residue)
QMean score : 0.474
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