Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNEKGLLIVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKF-PDALFIFLAPPSLDHLRERLVGRGTESNEKIQSRINEARKEVEM--MNLYDYVVVNDEVELAKNRIQCIVEAEHLKRERVEAKYRKMILEAKK
1EX7 Chain:A ((1-183))
-----SRPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAETGAHDKVIVNDDLDKAYKELKDFIF----------------------
General information:
TITO was launched using:
RESULT:
Template:
1EX7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64720 for 1323 contacts (-48.9/contact) +
2D Compatibility (PS) -19936 + (NN) -9477 + (LL) 2780
1D Compatibility (HY) -11200 + (ID) 3700
Total energy: -106253.0 ( -80.31 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_1EX7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EX7-query.scw
PDB file :
Tito_Scwrl_1EX7.pdb
: