Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGH---VFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
3JWK Chain:A ((7-166))
MRVSFMVAMDENRVIGKDNNLPWRLPSELQYVKKTTMGHPLIMGRKNYEAIGRPLPGRRNIIVTRNEGYHVEGCEVAHSVEEVFELCKNEEEIFIFGGAQIFDLFLPYVDKLYITKIHHAFEGDTFFPEMDMTNWKEVFVEKGLTDEKN--PYTYYYHVYEK
General information:
TITO was launched using:
RESULT:
Template:
3JWK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107655 for 1157 contacts (-93.0/contact) +
2D Compatibility (PS) -16842 + (NN) -3527 + (LL) 256
1D Compatibility (HY) -16800 + (ID) 3600
Total energy: -148168.0 ( -128.06 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_3JWK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JWK-query.scw
PDB file :
Tito_Scwrl_3JWK.pdb
: