Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKYSQDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLKLEGCKIDSVNHKGHLLQQLPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLVGNQSSFFILSDEQTKGRGRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALGIRDAIQHFSQDEVKVKWPNDIYIDNGKVCGFLTEMVANNDGIEAIICGIGINLTQQLENFDESIRHRATSIQLHDKNKLDRYQFLERLLQEIEKRYNQFLTLPFSEIREEYIAASNIWNRTLLFTENDKQFKGQAIDLDYDGYLIVRDEAGESHRLISADIDF--- |
| 1WNL Chain:A ((1-235)) | ------------------------------------------------------------------------MLGLKTSIIGRRVIYFQEITSTNEFAKTS--YLEEGTVIVADKQTMGHGRLNRKWESPEG-GLWLSIVLSPKVPQKDLPKIVFLGAVGVVETLKEFSID-GRIKWPNDVLVNYKKIAGVLVEGKGD-----KIVLGIGLNVNNKVPN-------GATSMKLELGSEVPLLSVFRSLITNLDRLYLNFLKNPMDILNLVRDN---MILGVRVKILGDGSFEGIAEDIDDFGRLIIRLDSGEVKKVIYGDVSLRFL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113567 for 1921 contacts (-59.1/contact) +
2D Compatibility (PS) -24924 + (NN) -8889 + (LL) 6160
1D Compatibility (HY) -18000 + (ID) 3600
Total energy: -162820.0 ( -84.76 by residue)
QMean score : 0.423
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