Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKKLLMNFFIVSPLLLATIATDFTPVPLSSNQIIKTAKASTNDNIKDLLDWYSSGSDTFTNSEVLD--NS-LGSMRIKNTDGSISLIIFPS--PYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTP---IELPLKVK-VH-GKDSPLKYWPKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEIN |
| 3R2T Chain:A ((55-249)) | ----------------------------------------NRLYDTNKLHQYYSGPSYELTNVSGQSQGYYDSNVLLFNQQNQKFQVFLLGKDENKYKEK---THGLDVFAVPELVDL-----DGRIFSVSGVTKKNVKSIFESLRTPNLLVKKIDDKDGFSIDEFFFIQKEEVSLKELDFKIRKLLIKKYKLYEGSAD-KGRIVINMKDENKYEIDLSDKLDFERMADVINSEQIKNIEVNLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32238 for 1340 contacts (-24.1/contact) +
2D Compatibility (PS) -19515 + (NN) -4466 + (LL) 3708
1D Compatibility (HY) -10800 + (ID) 2050
Total energy: -65361.0 ( -48.78 by residue)
QMean score : 0.504
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