Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MIQIHHANAFEIIKDFHQQNLKVDAIITDPPYNISVKNNFSTLKSAKRQGIDFGEWDKNFKLLEWIARYASLINPNGCMVIFCSYRFISYIADFLEENGFVVKDFIQWVKNNPMPRNIHRRYVQDTEFALWAVKKKAKWVFNKPKNEKYLRPLILKSPVVSGIERVKHPTQKSLTLMEKIISTHTNPNDTVLDPFMGS-GTTGLACKNLKRNFIGIESEKEYFQIAQKRLS
4LEU Chain:A ((71-252))
KLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQ-----------EETALAIKMFEVIQKQ----------------EWYQPDVFMYKDLIVSLAKS------KR---MDEAMALWEKMKKENLFPDSQTYTEVIRGFLRDGC-----------PADAMNVYEDMLKSPDPPEELPFRVLLKGLLPHPLLRNKVKKDFEELFPEKHAYDPPEE---
General information:
TITO was launched using:
RESULT:
Template:
4LEU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16500 for 1381 contacts (-11.9/contact) +
2D Compatibility (PS) -18958 + (NN) -8294 + (LL) 3340
1D Compatibility (HY) -12000 + (ID) 1350
Total energy: -53762.0 ( -38.93 by residue)
QMean score : 0.254
(partial model without unconserved sides chains):
PDB file :
Tito_4LEU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LEU-query.scw
PDB file :
Tito_Scwrl_4LEU.pdb
: