Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFLNDHINVFGLIAALVILVLTIYESSSLIKEMRDSKSQGELMENGHLIDGIGEFANNVPVGWIASFMCVIVWAFWYFFFGYPLSSFSQIGQYNEEVKAHNQKFEAKWKHLGQKELVDMGQGIFLVHCSQCHGITADGLHGSAQNLLRWDKEEGIMDTIKHGSKGMDYPAGEMPAIE--MDEKDAKAIASYVMAELSSVKK-TKNPQLIDKGKELFESMGCAGCHGNDGKGLQENQVFAADLTTYGTESFLRNILTHGKKG---NIGRMPS----FKYKNFSDLQVKALVEFIKSLKPLED |
| 3VRD Chain:A ((1-174)) | ----------------------------------------------------------------------------------------------------------------------EPTAEMLANNCAGCHGTRGNSAGPASPSIAQMDP-AVFVEVMEQFKSGEI-QSTIMGRIAKGYSTADFQKMAEYFKQQTYQPVKQSFDKALVAKGTKLHDK-YCEKCHVESGKPLAD-QDEYHILAGQW-TPYLRYAIEDFRAERRPMEKKMASKLKELL-KAEGEDGLDALFAFYASQQ---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VRD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23670 for 1196 contacts (-19.8/contact) +
2D Compatibility (PS) -17372 + (NN) -7122 + (LL) 9812
1D Compatibility (HY) -5200 + (ID) 1650
Total energy: -45202.0 ( -37.79 by residue)
QMean score : 0.319
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