Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKNILNLALVGALSASFLMAKPAHNANNSTHNTKETTDASAGVLATVDGRPITKSDFDMIKQRNPNFDFDKLKEKEKEALIEQAIRTALVENEAKAEKLNQTPEFKAMMEAVKKQALVEFWAKKQAEEVKKIQIPEKEMQDFYNANKDQLFVKQEAHARHILVKTEDEAKRIISEIDKQPKAKKEAKFIELANRDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGYHIIYLISKDSPVTYTYEQAKPTIKGMLQEKLFQERMNQRIEELRKHAKIVINK |
| 3TDB Chain:A ((73-154)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------ITRTKEEALELINGYIQKIKSGEE-DFESLASQFS-DCSSAKAR--GDLGAFSRGQMQKPFEDASFALRTGEMS-GPVFTDSGIHIILRTE---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TDB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4698 for 496 contacts (9.5/contact) +
2D Compatibility (PS) -8692 + (NN) -4043 + (LL) 17424
1D Compatibility (HY) -5600 + (ID) 1600
Total energy: 2187.0 ( 4.41 by residue)
QMean score : 0.661
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