Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MIIIPARLKSSRFENKMLEDIFGLPMVVRCAKNA---NLVDECVVACDDESIMKACQKFHIKAVLTSKHHNSGTERCLEAAQILGLKNDERVLNLQGDEPFLEKKVILALLEATQNAP--FMATCAKVIDEEQAKSPNLVKVVLDSQNNALYFSRSLIPFLRDFDAKRQTPLLGHIGIYGFHNKEILEELCALKPCVLEDTEKLEQLRALYYQKKILVKIVQSESMGIDTKEDLQNALKIFSPNLLKR-
1H7E Chain:A ((1-245))
SKAVIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQAFGGKAIMTRNDHESGTDRLVEVMHKV---EADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHAISAAEAAEPSTVKVVVNTRQDALYFSRSPIPYPRN---AEKARYLKHVGIYAYR-RDVLQNYSQLPESMPEQAESLEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRALMAQELAENA
General information:
TITO was launched using:
RESULT:
Template:
1H7E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -156431 for 1824 contacts (-85.8/contact) +
2D Compatibility (PS) -25948 + (NN) -12734 + (LL) 188
1D Compatibility (HY) -15600 + (ID) 4200
Total energy: -214725.0 ( -117.72 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_1H7E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H7E-query.scw
PDB file :
Tito_Scwrl_1H7E.pdb
: