Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNQASHLDNFMNAKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYSLYKKGYKVGVFDADIGLANLDVIFGVKTH--KNILHALKGEAKLQEIICE--IEPGLCLIPGDSGEEILKYISGAEALDRFVDEEGVLS-SLDYIVIDTGAGIGATTQAFLNASDCVVIVTTPDPSAITDAYACIKINSK-N--------KDELFLIANMVAQPKEGRATYERLFKVAKNNIASLELHYLGAIENSSLLKRYVRERKILRKIAPNDLFSQSIDQIASLLVSKLETGTLEIPKEGLKSFFKRLLKYLG |
| 3Q9L Chain:A ((2-251)) | --------------------------ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTENLYILPASQTRDK-DALTR-EGVAKVLDDLK--AMDFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAENGEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEI----LRIKLVGVIPEDQSVLRASNQGEPVILD-INADAGKAYADTVERLLGEERPFRFIEE---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158773 for 2083 contacts (-76.2/contact) +
2D Compatibility (PS) -24540 + (NN) -1705 + (LL) 2488
1D Compatibility (HY) -12000 + (ID) 2850
Total energy: -197380.0 ( -94.76 by residue)
QMean score : 0.525
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