Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQFHSSSALITPFKKDLSVDEAAYETLIKRQIFQGMDACVPVGTTGESATLTHKEHMRCIEIAIETCKSTKTPSNSRMKVLAGVGSNATSESLSLAKFAQKIGADAILCVSPYYNRPTQQGLFEHYKTIAQSVEIPVMLYDVPSRTGVSIEVPTALKLFREVPNIKAIKEASGSLKRVTELH-YYEKDFKIFSGEDSLNHSIMFSGGCGVISVTGNLMPNLISQMVNCALKFEYQQALEIQNKLFDLHQALFVETNPIPIKMAMHLAGLIENPSYRLPLVAPSKETIKLLEKTLQQYEVIA
4PFM Chain:B ((9-292))-------ALITPLNSDGTVDYTSLEKLVEYHITEGTDAIVAVGTTGESATLPISEH---IAVVGQTVKF----ASGRIPVIGGNGANATAEAIELTKAQNKLGVAAMLGVTPYYNKPSPKGLIAHYTAVAASTDIPQILYNVPGRTAVDM-LPETIAQLVEVPNIIGV-DATGDVARVKQLRDLCGNDFLLYSGDDATAREFLTLGGDGVISVANNIVPKLFKLMCDAALAGDTQAAMAAEDQIKGLFSALFCEANPIPVKWAAHKMGLISQGDIRLPLTELSTEFHGLLLDAMKNARIEV


General information:
TITO was launched using:
RESULT:

Template: 4PFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -177872 for 2460 contacts (-72.3/contact) +
2D Compatibility (PS) -30273 + (NN) -16261 + (LL) 980
1D Compatibility (HY) -23200 + (ID) 5950
Total energy: -252576.0 ( -102.67 by residue)
QMean score : 0.498

(partial model without unconserved sides chains):
PDB file : Tito_4PFM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PFM-query.scw
PDB file : Tito_Scwrl_4PFM.pdb: