Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLDQLEVSHDADSLCVVIEISKHSN-IKYELDKESGALMVDRVLYGAQNYPANYGFVPNTLGSDGDPVDALVLSDVAFQAGSVVKARLVGVLNMEDESGMDEKLLALPIDKIDPTHSYVKDIDDLSKHTLDKIKHFFETYKDLEPNKWVKVKGFENKESAIKVLEKAIKAYQG
1I6T Chain:A ((13-161))
------------EDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASFERAKN
General information:
TITO was launched using:
RESULT:
Template:
1I6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43332 for 1121 contacts (-38.7/contact) +
2D Compatibility (PS) -15916 + (NN) -4081 + (LL) 904
1D Compatibility (HY) -14800 + (ID) 3900
Total energy: -81125.0 ( -72.37 by residue)
QMean score : 0.469
(partial model without unconserved sides chains):
PDB file :
Tito_1I6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I6T-query.scw
PDB file :
Tito_Scwrl_1I6T.pdb
: