Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRSLAFCLLALLGLQVLGARDFSQLKNEELLKLAGTLPSNEAIDYRMEVSKRLKAL--------SAEDAKKFRANFSRIARKNLSKMSEEDFKKMREEVRKELEEKTKGLSAEEIKAKGLNVSVCSGDTRKVWCRAVKKKDEHCSPK
2NN4 Chain:A ((1-62))
-------------------------------------------LNTFYDVQQLLKTFGHIVYFGDRELEIEFMLDELKELYMNHM--IEKEQWARAAAVLRKELEQT-----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2NN4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4008 for 333 contacts (-12.0/contact) +
2D Compatibility (PS) -6138 + (NN) -5251 + (LL) 5896
1D Compatibility (HY) -4400 + (ID) 450
Total energy: -14351.0 ( -43.10 by residue)
QMean score : 0.729
(partial model without unconserved sides chains):
PDB file :
Tito_2NN4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NN4-query.scw
PDB file :
Tito_Scwrl_2NN4.pdb
: