Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRAKMKD---IYLDVEKSIKDLQSIFKNADGRDEKLKRFNQEALEVFQKLERESLKELESLKNNEEWENFTIAFYGETGAGKSTLIECLRMFFKEQSKVDQQERFKRLYSTYQYNHQNFILLDVPGIEGSEKKVIDQISNATQKAHAIFMLPKRLILRKKEKKGKGERLKKSKNSLIRKQRYGRFSTNRLIAQEP------------------------------------------------------------------------------------------------------------------------------------------ |
| 4IHQ Chain:A ((2-513)) | SFVEDYLTKLQERPTIIENPNILKGSKIFNAIYRVDDFVYIHIQSIKSEDGYNQYNVIEPPRPTHDEMEEIEEKFALSIGDKEPPEDTKEKEKLIRSILDKILLRMRLSVPKEYVIYHFIRDKLYTGSLEPLIRDPYIEDISIPGLGHVYIVHKVFGPMRTSIKFENYEELDNLIVSLSEKSYRPVSHNRPVVDASLPDGSRVNFVYGVDISRRGSNLTVRKFSRVP---TSITQLIMFGTLSSMMAAYIWTMLDE----GMNLFVCGETASGKTTTLNAITAFIPPNLKIVTIEDTPEL----TVPHSNWVAEVTRETGGEGTIKLFDLLKAALRQRPNYILVGAI--RDKEGNVAFQAMQTGHSVMATFHAANITTLIQRLTGYPIEVPKSYINNLNIALFQTALYDKKGNLIRRVVEVDEIIDIDPVTNDVVYIPAFTYDSVQDKMLFAGKGSSYLIENKIAVKRGIDRRNIGLLYDELQMRSRFLNLLVEKKIFNYYDVWDYILRARQMGLEEAIKYVSNI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IHQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 28385 for 1234 contacts (23.0/contact) +
2D Compatibility (PS) -18371 + (NN) 2469 + (LL) 1396
1D Compatibility (HY) -6400 + (ID) 1300
Total energy: 6179.0 ( 5.01 by residue)
QMean score : 0.200
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