Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQYANAYQAYQHNRVSVESPAKLIEMLYEGILRFSSQAKRCIENEDIEKKIYYINRVTDIFTELLNILDYEKGGKVAVYLTGLYTHQIKVLTQANVENDASKIDLVLNVARGLLEAWREIHSDELA
2B8I Chain:A ((1-77))
------------------IRPYMKALIYETLVNLANQD---------------PEQHATIRQNLYEQLDLPFDKQLALYAGALGPAS------SGKLENHEAISNAVDSVVQLLEI----------
General information:
TITO was launched using:
RESULT:
Template:
2B8I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46780 for 527 contacts (-88.8/contact) +
2D Compatibility (PS) -8103 + (NN) -2751 + (LL) 4756
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -57178.0 ( -108.50 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_2B8I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B8I-query.scw
PDB file :
Tito_Scwrl_2B8I.pdb
: