Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFQ--ENLAALDLEYLWHPCSQMQEHQNFPIIPIKKAQGIYLYDFNDNAYMDLISSWWVNLFGHNNAYISQQLKNQIDN--LEHVLLASFSHKPIITLSQRLCQLT---GMDKCFYADNGSSCIEIALKMSYHAHFLKNQTRR-KKLFLSLSNSYHGETLGALSV-GDVKLYKDTYTPLLLKNLITPVP---------KNDSEIENSLNALKRLLDKHGEEICAFIAEPLLQCAGNMHIYSAKYLKQAVLWCKQKNIHIIFDEIATGFGRTGSMFAYEQCGIK--PDFLCLSKGISGGYLPLSALLTHNEIYNQFYAPYEENKAFLHSHSYTGNALACACANATLDIFEKENVIEKNKALSEFIFSALQNALKPLIERQVVSDLRHLGMVFAFEVFLQTK----ERLSLAVFKKALKKGLLLRPLN-NTIYLMPPYIITHEEIKKAIAGLVEAIDELKKAENK |
| 1DTY Chain:A ((1-429)) | ----MTTDDLAFDERHIWHPYTSMTSPL--PVYPVVSAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMK-SQIDAM-SHVMFGEITHAPAIELCR-KLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWDAK-GE--ARDRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWD------ERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAE--IAPDILCLGKALTGGTMTLSATLTTREVAETISDG--EAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARD---A-EMVADVRVLGAIGVVETT----HPVN---MAALQKFFVEQGVWIRPF-GKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DTY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -301978 for 3445 contacts (-87.7/contact) +
2D Compatibility (PS) -43538 + (NN) -14804 + (LL) 2516
1D Compatibility (HY) -28400 + (ID) 6900
Total energy: -393104.0 ( -114.11 by residue)
QMean score : 0.456
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