Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGYASKLALKICLVGLCLFSTLGAEHLEQKGNYIYKGEEAYNNKEYERAASFYKSAIKNGESLAYILLGIMYENGRGVPKDYKKAVEYFQKAVDNDIPRGYNNLGVMYKEGKGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAVVYYKMAADVSSSRAYEGLSESYRYGLGVEKDKKKAEEYMQKACDFDIDKNCKKKNTSSR- |
| 3E4B Chain:A ((6-434)) | DQRLANEALKRGDTVTAQQNYQQLAELGYSEAQVGLAAQARLGRLLAAKATEAEHHEAESLLKKAFANGEGNTLIPLAMLYLQYPHSFPNVNAQQQISQWQAAGYPEAGLAQVLLYRTQGTYDQHLDDVERICKAALNTTDICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATL-----------------GTPDEKTAQALLEKIAPGYPASWVSLAQLLYD-FPELGDVEQMMKYLDNGRAADQPRAELLLGKLYYEGKWVPADAKAAEAHFEKAVGRE-VAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNGQNSADFAIAQLFSQGK---GTKPDPLNAYVFSQLAKAQDTPEANDLATQLEAPLTPAQRAEGQRLVQQELAARGT--------LLQLHA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E4B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40528 for 1763 contacts (-23.0/contact) +
2D Compatibility (PS) -24541 + (NN) -16108 + (LL) 1400
1D Compatibility (HY) 5200 + (ID) 2150
Total energy: -76727.0 ( -43.52 by residue)
QMean score : 0.367
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