Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --MHLESIVLRNFRNYENLELEFSPSVNVFLGENAQGKTNLLEAVLMLALAKSHRTTNDKDFIMWEKEEAKMEGRIAKHGQSVPLELAITQKGKRAKVNHLEQKKLSQYVGNLNVVIFAPEDLSLVKGAPGIRRRFLNMEIGQMQPIYLHNLSEYQRILQQRNQYLKMLQMKRKVDPILLDILTEQFADVAINLTKRRADFIQKLEAYAAPIHHQISRGLETLKIEYKASITLNGDDPEVWKADLLQKMESIKQREIDRGVTLIGPHRDDSLFYINGQNVQDFGSQGQQRTTALSIKLAEIDLIHEETGEYPVLLLDDVLSELDDYRQSHLLGAIEGKVQTFVTTTSTSGIDHE--TLKQATTFYVEKGTVKKS--- |
2O5V Chain:A ((2-359)) | GDVRLSALSTLNYRNLAPGTLNFPEGVTGIYGENGAGKTNLLEAAYLALTGQTDAP-RIEQLIQAGETEAYVRADLQQGGSLSIQEVGLGRGRRQLKVDGVRAR--TGDLPRGGAVWIRPEDSELVFGPPSGRRAYLDSLLSRLSARYGEQLSRYERTVSQRNAALR------GGEEWAMHVWDDVLLKLGTEIMLFRRRALTRLDELAREANAQLG-SRKTLALTLTESTS---------PETYAADLRGRRAEELARGSTVTGPHRDDLLLTLGDFPASDYASRGEGRTVALALRRAELELLREKFGEDPVLLLDDFTAELDPHRRQYLLDLAASVPQAIVTGTELAPGAALTLRAQAGRFTPVADEEMQAEGTA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O5V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103448 for 2879 contacts (-35.9/contact) +
2D Compatibility (PS) -37901 + (NN) -10331 + (LL) 1352
1D Compatibility (HY) -12800 + (ID) 4700
Total energy: -167828.0 ( -58.29 by residue)
QMean score : 0.440
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