Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEYKNGENRIYAVNDEGVEVGEVTFVPTG---------------EDMFIIDHTGVDDAARGQGIAQELVKRAVEKAKSEGKKIVPLCP----FAKAEFSKKPEYQEVEASK
2GAN Chain:A ((66-161))
------FDELYTYQKDNRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTLLEFAVKRLRSLGKDPYVVTFPNLEAYSYYYMKKG---------
General information:
TITO was launched using:
RESULT:
Template:
2GAN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8631 for 444 contacts (-19.4/contact) +
2D Compatibility (PS) -8979 + (NN) -8717 + (LL) 1112
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -31315.0 ( -70.53 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_2GAN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GAN-query.scw
PDB file :
Tito_Scwrl_2GAN.pdb
: