Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKERTTMMSNLKKFGLAFLSVILLVNVIFQTNFVKAATNYGSDFLKTVELLDADGNPQTDFGYYDSIKVHYTWEIPNSTNVKEGDTMEFVLPPELKIVTDLDFSLKDHDGNTVGHVIAKKS---TGQVVITFTDFVEKNSNISGYLDFWTNWDKSLVEGNENVPVEFPVNGTTETIDVGVGGKNQIDPDESLYKYGWADAEN-PELIQWVVRVNYSKQNIQNAVYEDFIGPKQ----VVDFNSIKAFHGEFDPDDNFTPGAEVPSSAITQTTDGFKVDLG--------------NLTDSVKISYYTTSTDNGASPNYTNKGQLTGDNFIKQEIEVATPTSGGGGGGEGTTGSVELTKTDDSSQKNPLEGAEFKLVNGAGATVQTGLKTNADGKLAISNLKYDTYQLIETKAPQGYVLDASPVKFTIDDTHQSLFVSKENTAIKGSVSLEKVDRDTKSLLADAEFELQDKDGNTLKTNLKTDQKGKLTVADLLPGEYQFVETKAPTGYILDTTPLKFKISTEALNVTVTKENTKKPEIPKVPVPPKKPEKPDKIISEDSKQTALPKTGDSPLVNGWGLLLVAISASGLIALRRK |
| 1N67 Chain:A ((28-359)) | ----------------------------------------GTDITNQLTNVTVGIDSGTTVYPHQAGYVKLNYGFSVPNSAVKGDTFKITVPKELNL-NGVTSTAKVPPIMAGDQVLANGVIDSDGNVIYTFTDYVNTKDDVKATLTMPAYIDPENVKKTGNVTLATGIGSTTANKTVLVDYEKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLTGNLKPNTDSNALIDQQNTSIKVYKVDNAADLSESYFVNPENFEDVTNSVNITFPNPNQYKVEFNTPDDQITTPYIVVVNGHIDPNSKGDLALRSTLYGYNSNIIWRSMSWDNEVAFNNGSGSGDGIDKPVVPEQPDEPGEIEPIPEK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N67.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 20595 for 2465 contacts (8.4/contact) +
2D Compatibility (PS) -33592 + (NN) -20293 + (LL) 16316
1D Compatibility (HY) -9200 + (ID) 2350
Total energy: -28524.0 ( -11.57 by residue)
QMean score : 0.284
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