Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VGLQDELTMMQPVVMKIFSKSVRENRLSHGYLFEGTRGTGKKRTALWLAQSLFCLESTETELACGKCTNCTRIASHNHPDVHLLEPDGASIKIDQVRALKQELSK---RGMESDQKVVIIYDAEKMTVQSANSLLKFIEEPEGGLLLLFLTTNPGQILPTIQSRLQPVTFKSLTFDSLLASLTAA----GI----SEQKARIYASITGSVEEAKAFEESEWFS--------------EARNVVIKLYEGIHH----QGTSPLIIIQESWMPLFKEKDKMALGLELLLLLYRDRLHLTLDENYEPICTAQKEMLGQDALRKSLSETTGEIEKILAAKSKLDSNMNTQLLMEQLVLEIQGR |
| 1SXJ Chain:E ((11-351)) | -KSLNA-LSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYR--------------NVVSSPYHLEITPS---NDRIVIQELLKEVAQMEQ-----RYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSQCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALNNELALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAV---LYDLLAHCIPANIILKELTFSLL------------------------DVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAKVMC- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123951 for 2013 contacts (-61.6/contact) +
2D Compatibility (PS) -30290 + (NN) -17168 + (LL) 3412
1D Compatibility (HY) -8400 + (ID) 2300
Total energy: -178697.0 ( -88.77 by residue)
QMean score : 0.565
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