Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKTWEEFLKQEAKQPYFIELMEAVKDARAKGNVY-PSEEDMFSCFRLCPYNQVKVVILGQDPYHGPGQAHGLSFSVQKDVRI-PPSLRNIYKELKTDLDIEPADHGYLAKWAEQGVLLMNTSWSVEEGKAGSHKKLGWATFTDHVLEELNNYDKPLVFILWGNHAIKAASGITNPQHLIIKGVHPSPLAASRGFFGSKPFSKTNAFLEEHERKPIDWDLNEQ
4WRZ Chain:A ((23-237))
--RGWAAALEPVADQ--VAHMGQFLRAEIAAGRRYLPAGSNVLRAFTF-PFDNVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPWPRSLANIFDEYTADLGYPLPSNGDLTPWAQRGVLLLNRVLTVRPSNPASHRGKGWEAVTECAIRALAARAAPLVAILWGRDASTLKPMLAAGNCVAIESPHPSPLSASRGFFGSRPFSRANELLVGMGAEPIDWRL---
General information:
TITO was launched using:
RESULT:
Template:
4WRZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107101 for 1729 contacts (-61.9/contact) +
2D Compatibility (PS) -23239 + (NN) -11470 + (LL) 552
1D Compatibility (HY) -16800 + (ID) 4300
Total energy: -162358.0 ( -93.90 by residue)
QMean score : 0.692
(partial model without unconserved sides chains):
PDB file :
Tito_4WRZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WRZ-query.scw
PDB file :
Tito_Scwrl_4WRZ.pdb
: