Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEIIKISPRGYCYGVIDAMVIAKNASLDPNLPRPIHILGMIVHNKHVTDAFESIGIYTVDGANREEILDKITTGTVIFTAHGVSPSVKAKAVAKGLTTIDATCPDVLHTYNLILEKQAAGYEIIYIGKKGHPEPEGAYG-----TAPDVVHLVETKADIDALSLLSDKIFVTNQTTMSKWDVADLMHYIKGKFPKAIQHQEICMATQVRQEAVALQAKDADLTIVVGDPRSNNTARLAQVSIEKAGTKAYRIADITELDIEWIKDAKKVAVTAGASTPTQLVREVLLFLEQFDAADKTTWKREHNQDFERILPKTKNKYMAEKRSQRLAHLKNGGS |
3DNF Chain:B ((11-274)) | ---------GFCFGVKRAVKLAEE-SLKESQGK-VYTLGPIIHNPQEVNRLKNLGVFPSQGEEFKE------GDTVIIRSHGIPPEKEEALRKKGLKVIDATCPYVKAVHEAVCQLTREGYFVVLVGEKNHPEVIGTLGYLRACNGKGIV--VETLEDIGE-ALKHERVGIVAQTTQNEEFFKEVVGEIALWVKEVKVINTICNATSLRQESVKKLAPEVDVMIIIGGKNSGNTRRLYYISKE-LNPNTYHIETAEELQPEWFRGVKRVGISAGASTPDWIIEQV--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125885 for 2072 contacts (-60.8/contact) +
2D Compatibility (PS) -27602 + (NN) -7588 + (LL) 5556
1D Compatibility (HY) -16000 + (ID) 4300
Total energy: -175819.0 ( -84.85 by residue)
QMean score : 0.505
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