Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLTKIEIITRPNRFHLFQKELAKIGVSGLTVTKALGTGLEKGFIELYRGTKKESNIHERMKIEIVVSTVPVEDVLRVVKETLRTGEPGDGKVFIYPLAEVVKISTGETGIDALQDKPSK
2XUL Chain:B ((1-112))
---MKKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQT----GSEYTVEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIRIRTGEKNADAI------
General information:
TITO was launched using:
RESULT:
Template:
2XUL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55897 for 704 contacts (-79.4/contact) +
2D Compatibility (PS) -11762 + (NN) -5255 + (LL) 484
1D Compatibility (HY) -5200 + (ID) 1950
Total energy: -79580.0 ( -113.04 by residue)
QMean score : 0.660
(partial model without unconserved sides chains):
PDB file :
Tito_2XUL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XUL-query.scw
PDB file :
Tito_Scwrl_2XUL.pdb
: