Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFGTTTIGIDLGTANILVYSKEKGIIL---------NEPSVVALNTNDGTVL---AIGQEAKEMIGKTPT--------------------------------------SISAVRPMKDGVIADFDLTSGLLREIMRRI-SVSGVRKPNVVVCTPTGATSVERRAISDAVRST-GARSVVLIEEPVAAAI--GADLPVAEPVANVIVDIGGGTSEIAIISYGGVVSSTSIRT-------GGDHMDEEIIQYIRKNYNLLIG-------------QTTAERIKMELGYAPIEHVTQTAD-----IRGRDLLT----GLPKTIQVSSTEIQSALAETL-QRILEAIRNTLELCPPELSGDIVDRGIILSGGGSLLQGFRDWLVEEIDVPVHMAPSPLESVAIGTGRSLVFA-DKLAKN |
| 1DKG Chain:D ((3-383)) | ----KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD-----GETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI-AGLEVKRIINEPTAAALAYGLDK--TGNRTIAVYDLGGGTFDISIIEIDEKTFEVLA--TNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSS-----------AQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN-RSIELLKVALQDAG--LSVSDID-DVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171391 for 2307 contacts (-74.3/contact) +
2D Compatibility (PS) -31986 + (NN) -16692 + (LL) 2324
1D Compatibility (HY) -4400 + (ID) 3800
Total energy: -225945.0 ( -97.94 by residue)
QMean score : 0.519
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