Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDKIAVIPGTFDPITNGHLDIIERAAKIFDVLYVSVLNNSSKKPLFTIEERMEMIRQVTAHLPNVQVESASGLTVDYAATRGATAIVRGLRAVSDFEYEMQIASMNRTLNADIETFFVMTNTKYSFLSSSMVKEVAQYQGDISELVPEIVNKAVQAKFK
3PXU Chain:A ((7-160))
----VAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSRAKKPFFSLEERLKIANEVLGHYPNVKVMGFTGLLKDFVRANDARVIVRGLRA---FEYEFQMAGMNRYLLPDVETMFMTPSDQYQFISGTIVREIAQLGGDVSKFVFPSVEKWLTEK--
General information:
TITO was launched using:
RESULT:
Template:
3PXU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107545 for 1154 contacts (-93.2/contact) +
2D Compatibility (PS) -16383 + (NN) -7743 + (LL) 308
1D Compatibility (HY) -16800 + (ID) 3600
Total energy: -151763.0 ( -131.51 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_3PXU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PXU-query.scw
PDB file :
Tito_Scwrl_3PXU.pdb
: