Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYTITLNPAIDRLLFIQGELEKRKTNRVKKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSDNLDKLYAILKEKHINHDFLVEAGTSTRECFVVLSDDTNGSTMIPEAGFTVSQT----NKVNLLKQIAKKVKKEDMVVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGEY---LNLAVEMGVDFIKPNEDEVIAILDEKTNS----LEENVRKLA-EKIPYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMNMPITETLKVATGCSASKVMQQDSSSFDLEAAGKLKNQVSIIQLEER |
| 2JG1 Chain:A ((21-330)) | MILTLTLNPSVDISYPLT-ALKLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGFIGGELGQFIAKKLDHADIKHAFYNI-KGETRNCIAILH--EGQQTEILEQGPEIDNQEAAGFIKHFEQMMEK----VEAVAISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSGATLQTVLENP-YKPTVIKPNISELYQLLNQPLDESLESLKQAVSQPLFEGIEWIIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILNHENDHDLLKKANTLGMLNAQEAQTGYVNLNNYDDLFNQIEVLEV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JG1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140473 for 2477 contacts (-56.7/contact) +
2D Compatibility (PS) -31817 + (NN) -7687 + (LL) 616
1D Compatibility (HY) -14400 + (ID) 3950
Total energy: -197711.0 ( -79.82 by residue)
QMean score : 0.442
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