Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLKKVAMGITVVMASSLLLVGCGSSDDSSKDKKS-TDTKQTETKKTAKTDGTMTDGTYKLEEKNFDDKGWKGFMSIEVKDGKITKANYDYKNKDGKLKSEDADY-EKAMKDKVGTGPQEYLKQLSDSLVKNQSAASVEVVSGATHSSDAFINYANQLIQAAQKADTT-TISINNLAKMEDGTYKLEEQNYAHGYRVVFSMDVKDGKITK-SDYNYVDKDGKLK-SDDADYEKNMKAKSGTGP-KEYIPALNKSLVEKQDVAAVDTVSGATNSSNQFKIYAAQLQNAAQNGNTDTIKVYNLVEAE------- |
| 2AXO Chain:A ((38-266)) | --AQEAVKGVVELFTSQ----GCASCPPADEALRKMI------------QKGDVVGLSYHVDY--WNYLGWT--------DSLASKENTERQYG----------YMRALGRNGVYT-PQAIL-------------------NGRDHVKGADVRGIYDRLDAFKREGQGLNVPVSSKFAGDEVEIDIGAGNGKADVVVAYFTREQTVDVKKMSYWHSVYDVQTVGMWDG-------------SPMTVKLPASVVAKVKK-------------------GGCAVLLQTANASGDPAAIVGASILLGNETQLEHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 109070 for 1623 contacts (67.2/contact) +
2D Compatibility (PS) -21906 + (NN) 4759 + (LL) 5496
1D Compatibility (HY) 6800 + (ID) 850
Total energy: 103369.0 ( 63.69 by residue)
QMean score : -0.011
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