Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKLIFAIVQDQDSNRLSDALTKGNF-GATKLATTGGFLK-----AGNTTFIIGTEDERVEDALAIIKENCKAREQMMTPSASLGVTVDTYVPYPIEVQVGGATVFVMPVESFHHF
1HWU Chain:A ((1-101))
MKQVTAIIKPFKLDEVRESLAEVGVTGLTVTEVK-GFG-YVVDFLPKVKIEVVVDDKVVEQAVDAIIKAART-G-----------------------KIGDGKIFVQEVEQVIR-
General information:
TITO was launched using:
RESULT:
Template:
1HWU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43728 for 525 contacts (-83.3/contact) +
2D Compatibility (PS) -9193 + (NN) -4742 + (LL) 1672
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -61291.0 ( -116.74 by residue)
QMean score : 0.657
(partial model without unconserved sides chains):
PDB file :
Tito_1HWU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HWU-query.scw
PDB file :
Tito_Scwrl_1HWU.pdb
: