Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKLNEALKKAERIVFLTGAGVSVPSGIPDYRSKNGLYAGMSSPEYMLSHTCLVREPEKFYQFVTENM-YYPNAVPNVIHKKMAEIETE-KDVTIITQNIDGLHEKAGSKKVVNFHGSLYHCYCQNCGMTVTAKDYL----K-S-DIHTDCGGVIRPDVVLYEEAISESAIDQSLTAIRKADLIVIVGTSFRVSPFCNLTDYR-NKKARIFAVNKERISLPYPFEMMESDAV-KVFEEI
1YC5 Chain:A ((3-238))MKEFLDLLNESRLTVTLTGAGISTPSGIPDF-------------QNVFDIDFFYSHPEEFYRFAKEGIFPMLQAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDVPLCDDCNSLIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGETPFDDIATLKYNMDVVEFARR-


General information:
TITO was launched using:
RESULT:

Template: 1YC5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129491 for 1774 contacts (-73.0/contact) +
2D Compatibility (PS) -23109 + (NN) -7206 + (LL) 340
1D Compatibility (HY) -17600 + (ID) 3300
Total energy: -180366.0 ( -101.67 by residue)
QMean score : 0.567

(partial model without unconserved sides chains):
PDB file : Tito_1YC5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YC5-query.scw
PDB file : Tito_Scwrl_1YC5.pdb: